miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|169230843|gb|EY030939.1|EY030939 ACCTACAATTCCATCATGAAGTGTGATGTTGACATCCGTAAAGATCTGTATGCCAACACTGTGCTTTCTGGTGGTTCCAC
CATGTACCCAGGTATTGCTGACCGCGTGCAAAAGGAAATTGCTTCTCTCGCTCCACCAACCATGAAGATCAAGATCATTG
CCCCCCCAGAGCGTAAATATTCTGTCTGGATTGGAGGCTCCATCTTGGCATCTCTTTCCACCTTCCAGCAGATGTGGATC
TCCAAGCAAGAATATGATGAGTCTGGTCCTGCAATTGTGCACCGCAAGTGCTTCTAAATTCACTGGAAATGTCCAAAAGT
GAAAAGTTGCGTTCTAGTAGACCAATCAACATGAAAGAAGACAGTGGAT




Most similar to sp|Q00215|ACTC_STYPL

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q00215|ACTC_STYPL Actin, cytoplasmic OS=Styela plicata PE=3 SV=1
          Length = 375

 Score =  196 bits (497), Expect = 5e-50
 Identities = 93/98 (94%), Positives = 98/98 (100%)
 Frame = +1

Query: 1   TYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRVQKEIASLAPPTMKIKIIAPPERKY 180
           TYNSIMKCDVDIRKDLYANTVLSGG+TMYPGIADR+QKEI++LAPPTMKIKIIAPPERKY
Sbjct: 278 TYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEISALAPPTMKIKIIAPPERKY 337

Query: 181 SVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 294
           SVWIGGSILASLSTFQQMWISKQEYDESGP+IVHRKCF
Sbjct: 338 SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375